STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_4311Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
F751_2321
Ubiquitin-40S ribosomal protein S27a-1.
    
 0.980
F751_6092
Ubiquitin-activating enzyme E1 2; Belongs to the ubiquitin-activating E1 family.
   
 0.979
F751_2642
Ubiquitin-60S ribosomal protein L40-2.
   
 0.978
F751_0764
E3 ubiquitin-protein ligase UPL3.
   
 0.948
F751_4271
Ubiquitin-NEDD8-like protein RUB2.
    
 0.831
F751_2494
Ubiquitin-like protein.
    
 0.831
F751_5219
SDE2-like protein.
    
 0.831
F751_0864
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.808
F751_0616
Ubiquitin-conjugating enzyme E2 variant 1C.
   
 0.784
F751_5763
Uncharacterized protein.
   
 0.784
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.