STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F751_5466LTV1-like protein. (484 aa)    
Predicted Functional Partners:
F751_3390
RNA-binding protein NOB1; Belongs to the NOB1 family.
   
 0.999
F751_6255
Bystin.
   
 0.999
F751_1700
Serine/threonine-protein kinase rio2.
   
 0.998
F751_3876
Pre-rRNA-processing protein TSR1-like protein.
   
 0.998
F751_0529
Serine/threonine-protein kinase RIO1.
   
 0.993
F751_3757
40S ribosomal protein S3-3.
   
 0.990
F751_4213
40S ribosomal protein S14-3; Belongs to the universal ribosomal protein uS11 family.
    
 0.988
F751_2593
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.988
F751_1985
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.987
F751_6663
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.986
Your Current Organism:
Auxenochlorella protothecoides
NCBI taxonomy Id: 3075
Other names: A. protothecoides, Auxenochlorella protothecoides (Krueger) Kalina & M.Puncoch., Chlorella protothecoides, Chlorella protothecoides Krueger, Chlorella protothecoides var. galactophila, Chlorella protothecoides var. galactophila Shihira & R.W.Krauss, SAG 211-7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.