STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_01202SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (256 aa)    
Predicted Functional Partners:
Rsub_12889
Chaperone; Belongs to the ClpA/ClpB family.
  
 
 0.657
Rsub_03836
Heat shock protein 70 kDa.
  
 
 0.614
Rsub_11362
HATPase_c domain-containing protein.
  
 
 0.564
Rsub_05463
ATP-dependent Clp protease ATP-binding subunit, chloroplastic.
  
 
 0.563
Rsub_07126
Chaperone chloroplastic-like; Belongs to the ClpA/ClpB family.
  
 
 0.563
Rsub_07507
ATP-dependent chaperone.
  
 
 0.563
Rsub_09151
ATP-dependent Clp protease ATP-binding subunit.
  
 
 0.563
Rsub_10227
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.563
Rsub_10595
ATP-dependent chaperone.
  
 
 0.563
Rsub_08772
ATP-dependent Clp protease ATP-binding subunit, chloroplastic; Belongs to the ClpA/ClpB family.
  
 
 0.563
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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