STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_02126Protein kinase domain-containing protein. (417 aa)    
Predicted Functional Partners:
Rsub_03317
Phosphoglucan phosphatase.
    
 0.672
Rsub_01564
AMPK1_CBM domain-containing protein.
    
 0.672
Rsub_01935
Protein kinase domain-containing protein.
  
 
  0.620
Rsub_07461
3-phosphoinositide dependent kinase; Belongs to the protein kinase superfamily.
  
 
  0.615
Rsub_09812
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.606
Rsub_04077
Uncharacterized protein; Belongs to the protein kinase superfamily.
  
 
  0.603
Rsub_00247
Protein kinase domain-containing protein.
  
 
0.599
Rsub_01428
Uncharacterized protein.
  
 
  0.582
Rsub_00844
Wee1 kinase.
  
 
  0.569
Rsub_04743
Protein kinase domain-containing protein.
  
 
  0.566
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.