STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_02156MFS transporter. (691 aa)    
Predicted Functional Partners:
Rsub_06837
Uncharacterized protein.
   
 0.962
Rsub_02885
Uncharacterized protein.
    
 0.925
Rsub_09666
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.797
Rsub_01754
Raptor_N domain-containing protein.
    
 0.788
Rsub_03996
Farnesyltransferase subunit beta.
    
 0.761
Rsub_10644
Uncharacterized protein.
    
 0.759
Rsub_09791
WD_REPEATS_REGION domain-containing protein.
    
 0.757
Rsub_01481
Uncharacterized protein.
    
 0.728
Rsub_07036
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.716
Rsub_03995
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.712
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.