Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_02480 | Rsub_02864 | A0A2V0NRW4 | A0A2V0NQ01 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine palmitoyltransferase. | 0.945 |
Rsub_02480 | Rsub_06100 | A0A2V0NRW4 | A0A2V0P1L4 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Tryptophan synthase. | 0.981 |
Rsub_02480 | Rsub_06441 | A0A2V0NRW4 | A0A2V0P6B0 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.965 |
Rsub_02480 | Rsub_06491 | A0A2V0NRW4 | A0A2V0P2X3 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine racemase. | 0.942 |
Rsub_02480 | Rsub_06615 | A0A2V0NRW4 | A0A2V0P3K7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.934 |
Rsub_02480 | Rsub_10398 | A0A2V0NRW4 | A0A2V0PKB4 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Uncharacterized protein. | 0.939 |
Rsub_02480 | Rsub_11120 | A0A2V0NRW4 | A0A2V0PER5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Long chain base biosynthesis. | 0.939 |
Rsub_02480 | Rsub_11425 | A0A2V0NRW4 | A0A2V0PH81 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine dehydratase. | 0.968 |
Rsub_02864 | Rsub_02480 | A0A2V0NQ01 | A0A2V0NRW4 | Serine palmitoyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.945 |
Rsub_02864 | Rsub_06100 | A0A2V0NQ01 | A0A2V0P1L4 | Serine palmitoyltransferase. | Tryptophan synthase. | 0.943 |
Rsub_02864 | Rsub_06441 | A0A2V0NQ01 | A0A2V0P6B0 | Serine palmitoyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.945 |
Rsub_02864 | Rsub_06491 | A0A2V0NQ01 | A0A2V0P2X3 | Serine palmitoyltransferase. | Serine racemase. | 0.941 |
Rsub_02864 | Rsub_06615 | A0A2V0NQ01 | A0A2V0P3K7 | Serine palmitoyltransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.944 |
Rsub_02864 | Rsub_10362 | A0A2V0NQ01 | A0A2V0PD42 | Serine palmitoyltransferase. | Uncharacterized protein. | 0.980 |
Rsub_02864 | Rsub_10398 | A0A2V0NQ01 | A0A2V0PKB4 | Serine palmitoyltransferase. | Uncharacterized protein. | 0.995 |
Rsub_02864 | Rsub_11120 | A0A2V0NQ01 | A0A2V0PER5 | Serine palmitoyltransferase. | Long chain base biosynthesis. | 0.995 |
Rsub_02864 | Rsub_11425 | A0A2V0NQ01 | A0A2V0PH81 | Serine palmitoyltransferase. | Threonine dehydratase. | 0.941 |
Rsub_02864 | Rsub_12852 | A0A2V0NQ01 | A0A2V0PPX6 | Serine palmitoyltransferase. | Uncharacterized protein. | 0.954 |
Rsub_06100 | Rsub_02480 | A0A2V0P1L4 | A0A2V0NRW4 | Tryptophan synthase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.981 |
Rsub_06100 | Rsub_02864 | A0A2V0P1L4 | A0A2V0NQ01 | Tryptophan synthase. | Serine palmitoyltransferase. | 0.943 |
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