Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00151 | Rsub_02721 | A0A2V0NPL3 | A0A2V0NYX5 | Selenocysteine-specific elongation factor. | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. | 0.647 |
Rsub_00151 | Rsub_04780 | A0A2V0NPL3 | A0A2V0NTZ6 | Selenocysteine-specific elongation factor. | Water dikinase. | 0.880 |
Rsub_00151 | Rsub_07752 | A0A2V0NPL3 | A0A2V0P623 | Selenocysteine-specific elongation factor. | Uncharacterized protein. | 0.870 |
Rsub_00151 | Rsub_09874 | A0A2V0NPL3 | A0A2V0PBG3 | Selenocysteine-specific elongation factor. | Uncharacterized protein. | 0.852 |
Rsub_00151 | Rsub_12737 | A0A2V0NPL3 | A0A2V0PS32 | Selenocysteine-specific elongation factor. | Thioredoxin reductase. | 0.556 |
Rsub_00617 | Rsub_02100 | A0A2V0NSU4 | A0A2V0NUK2 | Cysteine desulfurase. | Molybdenum cofactor sulfurase. | 0.585 |
Rsub_00617 | Rsub_03568 | A0A2V0NSU4 | A0A2V0NUA9 | Cysteine desulfurase. | Molybdenum cofactor sulfurase. | 0.585 |
Rsub_00617 | Rsub_04780 | A0A2V0NSU4 | A0A2V0NTZ6 | Cysteine desulfurase. | Water dikinase. | 0.947 |
Rsub_00617 | Rsub_07743 | A0A2V0NSU4 | A0A2V0P6F4 | Cysteine desulfurase. | Molybdenum cofactor sulfurase. | 0.585 |
Rsub_00617 | Rsub_08427 | A0A2V0NSU4 | A0A2V0PF66 | Cysteine desulfurase. | Thioredoxin reductase. | 0.942 |
Rsub_00617 | Rsub_12737 | A0A2V0NSU4 | A0A2V0PS32 | Cysteine desulfurase. | Thioredoxin reductase. | 0.948 |
Rsub_02100 | Rsub_00617 | A0A2V0NUK2 | A0A2V0NSU4 | Molybdenum cofactor sulfurase. | Cysteine desulfurase. | 0.585 |
Rsub_02100 | Rsub_04780 | A0A2V0NUK2 | A0A2V0NTZ6 | Molybdenum cofactor sulfurase. | Water dikinase. | 0.683 |
Rsub_02100 | Rsub_08427 | A0A2V0NUK2 | A0A2V0PF66 | Molybdenum cofactor sulfurase. | Thioredoxin reductase. | 0.421 |
Rsub_02100 | Rsub_12737 | A0A2V0NUK2 | A0A2V0PS32 | Molybdenum cofactor sulfurase. | Thioredoxin reductase. | 0.928 |
Rsub_02721 | Rsub_00151 | A0A2V0NYX5 | A0A2V0NPL3 | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. | Selenocysteine-specific elongation factor. | 0.647 |
Rsub_02721 | Rsub_04780 | A0A2V0NYX5 | A0A2V0NTZ6 | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. | Water dikinase. | 0.968 |
Rsub_03568 | Rsub_00617 | A0A2V0NUA9 | A0A2V0NSU4 | Molybdenum cofactor sulfurase. | Cysteine desulfurase. | 0.585 |
Rsub_03568 | Rsub_04780 | A0A2V0NUA9 | A0A2V0NTZ6 | Molybdenum cofactor sulfurase. | Water dikinase. | 0.683 |
Rsub_03568 | Rsub_08427 | A0A2V0NUA9 | A0A2V0PF66 | Molybdenum cofactor sulfurase. | Thioredoxin reductase. | 0.421 |
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