Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_01530 | Rsub_02776 | A0A2V0NN90 | A0A2V0NQW9 | P-loop containing nucleoside triphosphate hydrolase. | Uncharacterized protein. | 0.768 |
Rsub_01530 | Rsub_03892 | A0A2V0NN90 | A0A2V0P1G6 | P-loop containing nucleoside triphosphate hydrolase. | Protein kinase domain-containing protein. | 0.738 |
Rsub_01530 | Rsub_04072 | A0A2V0NN90 | A0A2V0NVU5 | P-loop containing nucleoside triphosphate hydrolase. | Flagellar associated protein. | 0.649 |
Rsub_01530 | Rsub_05700 | A0A2V0NN90 | A0A2V0P0I5 | P-loop containing nucleoside triphosphate hydrolase. | Uncharacterized protein. | 0.508 |
Rsub_02472 | Rsub_04072 | A0A2V0NRV3 | A0A2V0NVU5 | Uncharacterized protein. | Flagellar associated protein. | 0.576 |
Rsub_02472 | Rsub_09529 | A0A2V0NRV3 | A0A2V0PB31 | Uncharacterized protein. | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.606 |
Rsub_02776 | Rsub_01530 | A0A2V0NQW9 | A0A2V0NN90 | Uncharacterized protein. | P-loop containing nucleoside triphosphate hydrolase. | 0.768 |
Rsub_02776 | Rsub_03843 | A0A2V0NQW9 | A0A2V0NTI8 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.455 |
Rsub_02776 | Rsub_03892 | A0A2V0NQW9 | A0A2V0P1G6 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.476 |
Rsub_02776 | Rsub_04072 | A0A2V0NQW9 | A0A2V0NVU5 | Uncharacterized protein. | Flagellar associated protein. | 0.660 |
Rsub_02776 | Rsub_07239 | A0A2V0NQW9 | A0A2V0PBF0 | Uncharacterized protein. | HMG box domain-containing protein. | 0.965 |
Rsub_02776 | Rsub_08089 | A0A2V0NQW9 | A0A2V0P7Z6 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.455 |
Rsub_02776 | Rsub_08868 | A0A2V0NQW9 | A0A2V0PDZ4 | Uncharacterized protein. | FACT complex subunit-like. | 0.714 |
Rsub_02776 | Rsub_09529 | A0A2V0NQW9 | A0A2V0PB31 | Uncharacterized protein. | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.451 |
Rsub_03843 | Rsub_02776 | A0A2V0NTI8 | A0A2V0NQW9 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Uncharacterized protein. | 0.455 |
Rsub_03843 | Rsub_04072 | A0A2V0NTI8 | A0A2V0NVU5 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Flagellar associated protein. | 0.558 |
Rsub_03843 | Rsub_05700 | A0A2V0NTI8 | A0A2V0P0I5 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Uncharacterized protein. | 0.999 |
Rsub_03843 | Rsub_07239 | A0A2V0NTI8 | A0A2V0PBF0 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | HMG box domain-containing protein. | 0.463 |
Rsub_03843 | Rsub_08868 | A0A2V0NTI8 | A0A2V0PDZ4 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | FACT complex subunit-like. | 0.974 |
Rsub_03843 | Rsub_09529 | A0A2V0NTI8 | A0A2V0PB31 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. | 0.438 |
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