STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_03706Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
Rsub_07555
Nucleoside diphosphate kinase.
    
  0.943
Rsub_06872
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
  0.943
Rsub_11774
Nucleoside diphosphate kinase.
    
  0.942
Rsub_01065
Deoxycytidylate deaminase.
    
  0.931
Rsub_10141
FAD-binding PCMH-type domain-containing protein; Belongs to the 5'-nucleotidase family.
   
 
  0.930
Rsub_00541
Ribonucleoside-diphosphate reductase small chain.
    
  0.926
Rsub_13042
Ribonucleoside-diphosphate reductase small chain.
    
  0.926
Rsub_02772
Ribonucleoside-diphosphate reductase small chain.
    
  0.924
Rsub_08794
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
    
  0.715
Rsub_09742
SurE domain-containing protein.
    
  0.686
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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