Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00541 | Rsub_02772 | A0A2V0NL83 | A0A2V0NQZ9 | Ribonucleoside-diphosphate reductase small chain. | Ribonucleoside-diphosphate reductase small chain. | 0.926 |
Rsub_00541 | Rsub_03706 | A0A2V0NL83 | A0A2V0NVZ3 | Ribonucleoside-diphosphate reductase small chain. | Uncharacterized protein. | 0.926 |
Rsub_00541 | Rsub_06872 | A0A2V0NL83 | A0A2V0P7L7 | Ribonucleoside-diphosphate reductase small chain. | Nucleoside diphosphate kinase; Belongs to the NDK family. | 0.931 |
Rsub_00541 | Rsub_07555 | A0A2V0NL83 | A0A2V0P5A2 | Ribonucleoside-diphosphate reductase small chain. | Nucleoside diphosphate kinase. | 0.931 |
Rsub_00541 | Rsub_11774 | A0A2V0NL83 | A0A2V0PI64 | Ribonucleoside-diphosphate reductase small chain. | Nucleoside diphosphate kinase. | 0.928 |
Rsub_01065 | Rsub_03706 | A0A2V0NS27 | A0A2V0NVZ3 | Deoxycytidylate deaminase. | Uncharacterized protein. | 0.931 |
Rsub_01065 | Rsub_08794 | A0A2V0NS27 | A0A2V0P9K0 | Deoxycytidylate deaminase. | UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. | 0.922 |
Rsub_01065 | Rsub_10141 | A0A2V0NS27 | A0A2V0PI02 | Deoxycytidylate deaminase. | FAD-binding PCMH-type domain-containing protein; Belongs to the 5'-nucleotidase family. | 0.935 |
Rsub_02772 | Rsub_00541 | A0A2V0NQZ9 | A0A2V0NL83 | Ribonucleoside-diphosphate reductase small chain. | Ribonucleoside-diphosphate reductase small chain. | 0.926 |
Rsub_02772 | Rsub_03706 | A0A2V0NQZ9 | A0A2V0NVZ3 | Ribonucleoside-diphosphate reductase small chain. | Uncharacterized protein. | 0.924 |
Rsub_02772 | Rsub_06872 | A0A2V0NQZ9 | A0A2V0P7L7 | Ribonucleoside-diphosphate reductase small chain. | Nucleoside diphosphate kinase; Belongs to the NDK family. | 0.966 |
Rsub_02772 | Rsub_07555 | A0A2V0NQZ9 | A0A2V0P5A2 | Ribonucleoside-diphosphate reductase small chain. | Nucleoside diphosphate kinase. | 0.966 |
Rsub_02772 | Rsub_11774 | A0A2V0NQZ9 | A0A2V0PI64 | Ribonucleoside-diphosphate reductase small chain. | Nucleoside diphosphate kinase. | 0.934 |
Rsub_02772 | Rsub_13042 | A0A2V0NQZ9 | A0A2V0PRQ9 | Ribonucleoside-diphosphate reductase small chain. | Ribonucleoside-diphosphate reductase small chain. | 0.926 |
Rsub_03706 | Rsub_00541 | A0A2V0NVZ3 | A0A2V0NL83 | Uncharacterized protein. | Ribonucleoside-diphosphate reductase small chain. | 0.926 |
Rsub_03706 | Rsub_01065 | A0A2V0NVZ3 | A0A2V0NS27 | Uncharacterized protein. | Deoxycytidylate deaminase. | 0.931 |
Rsub_03706 | Rsub_02772 | A0A2V0NVZ3 | A0A2V0NQZ9 | Uncharacterized protein. | Ribonucleoside-diphosphate reductase small chain. | 0.924 |
Rsub_03706 | Rsub_06872 | A0A2V0NVZ3 | A0A2V0P7L7 | Uncharacterized protein. | Nucleoside diphosphate kinase; Belongs to the NDK family. | 0.943 |
Rsub_03706 | Rsub_07555 | A0A2V0NVZ3 | A0A2V0P5A2 | Uncharacterized protein. | Nucleoside diphosphate kinase. | 0.943 |
Rsub_03706 | Rsub_08794 | A0A2V0NVZ3 | A0A2V0P9K0 | Uncharacterized protein. | UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. | 0.715 |
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