Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00645 | Rsub_02065 | A0A2V0NQV3 | A0A2V0NVB4 | DNA-directed RNA polymerase IV and V subunit 3. | RTR1-type domain-containing protein. | 0.988 |
Rsub_00645 | Rsub_02164 | A0A2V0NQV3 | A0A2V0NWH1 | DNA-directed RNA polymerase IV and V subunit 3. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.829 |
Rsub_00645 | Rsub_03437 | A0A2V0NQV3 | A0A2V0NS26 | DNA-directed RNA polymerase IV and V subunit 3. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.700 |
Rsub_00645 | Rsub_03757 | A0A2V0NQV3 | A0A2V0NW39 | DNA-directed RNA polymerase IV and V subunit 3. | Uncharacterized protein. | 0.589 |
Rsub_00645 | Rsub_07000 | A0A2V0NQV3 | A0A2V0P3N0 | DNA-directed RNA polymerase IV and V subunit 3. | DNA-directed RNA polymerase II subunit. | 0.999 |
Rsub_00645 | Rsub_07520 | A0A2V0NQV3 | A0A2V0P616 | DNA-directed RNA polymerase IV and V subunit 3. | DNA-directed RNA polymerase I and III subunit. | 0.765 |
Rsub_00645 | Rsub_10848 | A0A2V0NQV3 | A0A2V0PGG3 | DNA-directed RNA polymerase IV and V subunit 3. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
Rsub_00645 | Rsub_11739 | A0A2V0NQV3 | A0A2V0PPD8 | DNA-directed RNA polymerase IV and V subunit 3. | DNA-directed RNA polymerase II and IV subunit-like. | 0.999 |
Rsub_02065 | Rsub_00645 | A0A2V0NVB4 | A0A2V0NQV3 | RTR1-type domain-containing protein. | DNA-directed RNA polymerase IV and V subunit 3. | 0.988 |
Rsub_02065 | Rsub_02164 | A0A2V0NVB4 | A0A2V0NWH1 | RTR1-type domain-containing protein. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.515 |
Rsub_02065 | Rsub_03437 | A0A2V0NVB4 | A0A2V0NS26 | RTR1-type domain-containing protein. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.828 |
Rsub_02065 | Rsub_03757 | A0A2V0NVB4 | A0A2V0NW39 | RTR1-type domain-containing protein. | Uncharacterized protein. | 0.596 |
Rsub_02065 | Rsub_07000 | A0A2V0NVB4 | A0A2V0P3N0 | RTR1-type domain-containing protein. | DNA-directed RNA polymerase II subunit. | 0.990 |
Rsub_02065 | Rsub_07520 | A0A2V0NVB4 | A0A2V0P616 | RTR1-type domain-containing protein. | DNA-directed RNA polymerase I and III subunit. | 0.937 |
Rsub_02065 | Rsub_10848 | A0A2V0NVB4 | A0A2V0PGG3 | RTR1-type domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
Rsub_02065 | Rsub_11739 | A0A2V0NVB4 | A0A2V0PPD8 | RTR1-type domain-containing protein. | DNA-directed RNA polymerase II and IV subunit-like. | 0.990 |
Rsub_02164 | Rsub_00645 | A0A2V0NWH1 | A0A2V0NQV3 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | DNA-directed RNA polymerase IV and V subunit 3. | 0.829 |
Rsub_02164 | Rsub_02065 | A0A2V0NWH1 | A0A2V0NVB4 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RTR1-type domain-containing protein. | 0.515 |
Rsub_02164 | Rsub_03757 | A0A2V0NWH1 | A0A2V0NW39 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Uncharacterized protein. | 0.605 |
Rsub_02164 | Rsub_07520 | A0A2V0NWH1 | A0A2V0P616 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | DNA-directed RNA polymerase I and III subunit. | 0.401 |
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