STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_04934Peptidylprolyl isomerase. (208 aa)    
Predicted Functional Partners:
Rsub_00186
Uncharacterized protein.
    
 0.610
Rsub_07297
CS domain-containing protein.
   
 0.537
Rsub_09529
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.517
Rsub_03836
Heat shock protein 70 kDa.
   
 0.516
Rsub_11604
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
   0.468
Rsub_04830
ATP-dependent molecular chaperone.
   
 0.443
Rsub_05861
Uncharacterized protein.
   
 0.443
Rsub_10951
Endoplasmin.
   
 0.443
Rsub_10952
Endoplasmin.
   
 0.443
Rsub_11638
Endoplasmin.
   
 0.443
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.