STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_05381DNL-type domain-containing protein. (350 aa)    
Predicted Functional Partners:
Rsub_11015
PsbP domain-containing protein.
  
     0.526
Rsub_10758
PsbP domain-containing protein.
  
     0.522
Rsub_08867
Chaperone dnaJ.
  
     0.520
Rsub_04196
Uncharacterized protein.
  
     0.518
Rsub_12617
Uncharacterized protein.
  
     0.513
Rsub_08379
PsbP domain-containing protein.
  
     0.512
Rsub_03059
PHD-type domain-containing protein.
  
     0.508
Rsub_08852
PsbP domain-containing protein.
  
     0.504
Rsub_07326
Histidine-containing phosphotransfer-like.
  
     0.502
Rsub_09530
Uncharacterized protein.
  
     0.500
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.