STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_0457250S ribosomal protein, chloroplastic; Belongs to the universal ribosomal protein uL24 family. (192 aa)    
Predicted Functional Partners:
Rsub_04257
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.996
Rsub_06047
60S ribosomal protein L5.
  
 0.996
Rsub_11865
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
  
 0.996
Rsub_02782
60S ribosomal protein L31.
   
 0.995
Rsub_06749
Ribosomal S14 protein, mitochondrial.
  
 0.995
Rsub_09622
60S ribosomal protein L35a.
   
 0.995
Rsub_10402
60S ribosomal protein L30.
   
 0.995
Rsub_00047
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.994
Rsub_00358
30S ribosomal protein S9.
  
 
 0.994
Rsub_03392
30S ribosomal protein S6.
   
 
 0.994
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.