STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_05075Mitochondrial import inner membrane translocase subunit-like. (428 aa)    
Predicted Functional Partners:
Rsub_07252
Mitochondrial import inner membrane translocase subunit-like.
    
 0.989
Rsub_09987
Mitochondrial import inner membrane translocase subunit-like.
    
 0.988
Rsub_06582
Mitochondrial import inner membrane translocase subunit-like.
   
 0.956
Rsub_05034
Mitochondrial import inner membrane translocase subunit.
   
 0.956
Rsub_01794
Mitochondrial import inner membrane translocase subunit Tim16.
   
 0.921
Rsub_04573
Mitochondrial translocase.
   
 0.912
Rsub_03135
Tim44 domain-containing protein.
   
 0.875
Rsub_05696
J domain-containing protein.
   
 0.788
Rsub_13095
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.760
Rsub_13311
Prohibitin.
   
 
 0.711
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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