Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00229 | Rsub_06434 | A0A2V0NJT6 | A0A2V0P0J8 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Uncharacterized protein. | 0.606 |
Rsub_00229 | Rsub_12227 | A0A2V0NJT6 | A0A2V0PQK0 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Uncharacterized protein. | 0.606 |
Rsub_00832 | Rsub_06434 | A0A2V0NRC8 | A0A2V0P0J8 | 26S proteasome regulatory subunit. | Uncharacterized protein. | 0.606 |
Rsub_00832 | Rsub_12227 | A0A2V0NRC8 | A0A2V0PQK0 | 26S proteasome regulatory subunit. | Uncharacterized protein. | 0.606 |
Rsub_03120 | Rsub_06434 | A0A2V0NTB1 | A0A2V0P0J8 | Adenosine kinase-like. | Uncharacterized protein. | 0.606 |
Rsub_03120 | Rsub_12227 | A0A2V0NTB1 | A0A2V0PQK0 | Adenosine kinase-like. | Uncharacterized protein. | 0.606 |
Rsub_03288 | Rsub_06434 | A0A2V0NZB3 | A0A2V0P0J8 | Sugar carbohydrate kinase. | Uncharacterized protein. | 0.606 |
Rsub_03288 | Rsub_12227 | A0A2V0NZB3 | A0A2V0PQK0 | Sugar carbohydrate kinase. | Uncharacterized protein. | 0.606 |
Rsub_05000 | Rsub_06434 | A0A2V0P483 | A0A2V0P0J8 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Uncharacterized protein. | 0.606 |
Rsub_05000 | Rsub_12227 | A0A2V0P483 | A0A2V0PQK0 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Uncharacterized protein. | 0.606 |
Rsub_05031 | Rsub_06434 | A0A2V0P161 | A0A2V0P0J8 | PfkB domain-containing protein. | Uncharacterized protein. | 0.606 |
Rsub_05031 | Rsub_12227 | A0A2V0P161 | A0A2V0PQK0 | PfkB domain-containing protein. | Uncharacterized protein. | 0.606 |
Rsub_05734 | Rsub_06434 | A0A2V0NZ31 | A0A2V0P0J8 | PfkB domain-containing protein. | Uncharacterized protein. | 0.606 |
Rsub_05734 | Rsub_12227 | A0A2V0NZ31 | A0A2V0PQK0 | PfkB domain-containing protein. | Uncharacterized protein. | 0.606 |
Rsub_06434 | Rsub_00229 | A0A2V0P0J8 | A0A2V0NJT6 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.606 |
Rsub_06434 | Rsub_00832 | A0A2V0P0J8 | A0A2V0NRC8 | Uncharacterized protein. | 26S proteasome regulatory subunit. | 0.606 |
Rsub_06434 | Rsub_03120 | A0A2V0P0J8 | A0A2V0NTB1 | Uncharacterized protein. | Adenosine kinase-like. | 0.606 |
Rsub_06434 | Rsub_03288 | A0A2V0P0J8 | A0A2V0NZB3 | Uncharacterized protein. | Sugar carbohydrate kinase. | 0.606 |
Rsub_06434 | Rsub_05000 | A0A2V0P0J8 | A0A2V0P483 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.606 |
Rsub_06434 | Rsub_05031 | A0A2V0P0J8 | A0A2V0P161 | Uncharacterized protein. | PfkB domain-containing protein. | 0.606 |
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