STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_04130ATPase. (180 aa)    
Predicted Functional Partners:
Rsub_00503
Magnesium protoporphyrin IX chloroplastic-like.
    
 0.618
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.618
Rsub_04132
AAA_lid_8 domain-containing protein.
 
     0.589
Rsub_06904
Magnesium chelatase subunit H.
     
 0.583
Rsub_09919
Protoporphyrin IX magnesium chelatase.
     
 0.583
Rsub_12421
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.520
Rsub_01431
VWFA domain-containing protein.
  
     0.439
Rsub_08380
VWFA domain-containing protein.
  
     0.419
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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