Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00120 | Rsub_02428 | A0A2V0NKA3 | A0A2V0NUG9 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.936 |
Rsub_00120 | Rsub_05893 | A0A2V0NKA3 | A0A2V0P2P1 | Aspartate aminotransferase. | Alanine aminotransferase. | 0.937 |
Rsub_00120 | Rsub_06441 | A0A2V0NKA3 | A0A2V0P6B0 | Aspartate aminotransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.429 |
Rsub_00120 | Rsub_07051 | A0A2V0NKA3 | A0A2V0PBH1 | Aspartate aminotransferase. | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.476 |
Rsub_00120 | Rsub_07967 | A0A2V0NKA3 | A0A2V0PCF8 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.934 |
Rsub_00120 | Rsub_10977 | A0A2V0NKA3 | A0A2V0PEP7 | Aspartate aminotransferase. | Malic enzyme. | 0.602 |
Rsub_00120 | Rsub_12317 | A0A2V0NKA3 | A0A2V0PHV2 | Aspartate aminotransferase. | Aldolase-type TIM barrel family. | 0.557 |
Rsub_02428 | Rsub_00120 | A0A2V0NUG9 | A0A2V0NKA3 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.936 |
Rsub_02428 | Rsub_05893 | A0A2V0NUG9 | A0A2V0P2P1 | Aspartate aminotransferase. | Alanine aminotransferase. | 0.943 |
Rsub_02428 | Rsub_07051 | A0A2V0NUG9 | A0A2V0PBH1 | Aspartate aminotransferase. | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.476 |
Rsub_02428 | Rsub_07967 | A0A2V0NUG9 | A0A2V0PCF8 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.966 |
Rsub_02428 | Rsub_10977 | A0A2V0NUG9 | A0A2V0PEP7 | Aspartate aminotransferase. | Malic enzyme. | 0.461 |
Rsub_02428 | Rsub_12317 | A0A2V0NUG9 | A0A2V0PHV2 | Aspartate aminotransferase. | Aldolase-type TIM barrel family. | 0.557 |
Rsub_02765 | Rsub_03874 | A0A2V0NYQ4 | A0A2V0NUK7 | Dihydrolipoyl dehydrogenase. | Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.451 |
Rsub_02765 | Rsub_05893 | A0A2V0NYQ4 | A0A2V0P2P1 | Dihydrolipoyl dehydrogenase. | Alanine aminotransferase. | 0.939 |
Rsub_02765 | Rsub_06441 | A0A2V0NYQ4 | A0A2V0P6B0 | Dihydrolipoyl dehydrogenase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.948 |
Rsub_02765 | Rsub_07051 | A0A2V0NYQ4 | A0A2V0PBH1 | Dihydrolipoyl dehydrogenase. | Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.606 |
Rsub_02765 | Rsub_13002 | A0A2V0NYQ4 | A0A2V0PSF6 | Dihydrolipoyl dehydrogenase. | Aminotran_5 domain-containing protein. | 0.937 |
Rsub_03874 | Rsub_02765 | A0A2V0NUK7 | A0A2V0NYQ4 | Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Dihydrolipoyl dehydrogenase. | 0.451 |
Rsub_03874 | Rsub_05893 | A0A2V0NUK7 | A0A2V0P2P1 | Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Alanine aminotransferase. | 0.937 |
page 1 of 4