STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_0555526S proteasome non-ATPase regulatory subunit 4-like. (358 aa)    
Predicted Functional Partners:
Rsub_06299
26S proteasome non-ATPase regulatory subunit 13.
   
 0.999
Rsub_06181
26S proteasome non-ATPase regulatory subunit 12-like.
   
 0.999
Rsub_09776
26S proteasome non-ATPase regulatory subunit.
   
 0.999
Rsub_10493
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.999
Rsub_12518
26S proteasome regulatory subunit.
   
 0.999
Rsub_13365
26S proteasome regulatory subunit-like; Belongs to the AAA ATPase family.
   
 0.999
Rsub_00420
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.998
Rsub_00833
26S protease regulatory subunit 8-like protein; Belongs to the AAA ATPase family.
   
 0.998
Rsub_07022
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.998
Rsub_08329
26S proteasome regulatory subunit.
   
 0.998
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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