Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_01095 | Rsub_06575 | A0A2V0NS58 | A0A2V0P3G7 | Uncharacterized protein. | Centrin. | 0.686 |
Rsub_01095 | Rsub_11504 | A0A2V0NS58 | A0A2V0PKI4 | Uncharacterized protein. | Uncharacterized protein. | 0.544 |
Rsub_02607 | Rsub_06575 | A0A2V0NWG5 | A0A2V0P3G7 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Centrin. | 0.680 |
Rsub_02607 | Rsub_11059 | A0A2V0NWG5 | A0A2V0PFE1 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Uncharacterized protein. | 0.962 |
Rsub_03868 | Rsub_03892 | A0A2V0NZK2 | A0A2V0P1G6 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.573 |
Rsub_03868 | Rsub_06575 | A0A2V0NZK2 | A0A2V0P3G7 | Uncharacterized protein. | Centrin. | 0.770 |
Rsub_03892 | Rsub_03868 | A0A2V0P1G6 | A0A2V0NZK2 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.573 |
Rsub_03892 | Rsub_06575 | A0A2V0P1G6 | A0A2V0P3G7 | Protein kinase domain-containing protein. | Centrin. | 0.643 |
Rsub_03892 | Rsub_07948 | A0A2V0P1G6 | A0A2V0PBF9 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.495 |
Rsub_03892 | Rsub_11504 | A0A2V0P1G6 | A0A2V0PKI4 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.401 |
Rsub_06575 | Rsub_01095 | A0A2V0P3G7 | A0A2V0NS58 | Centrin. | Uncharacterized protein. | 0.686 |
Rsub_06575 | Rsub_02607 | A0A2V0P3G7 | A0A2V0NWG5 | Centrin. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.680 |
Rsub_06575 | Rsub_03868 | A0A2V0P3G7 | A0A2V0NZK2 | Centrin. | Uncharacterized protein. | 0.770 |
Rsub_06575 | Rsub_03892 | A0A2V0P3G7 | A0A2V0P1G6 | Centrin. | Protein kinase domain-containing protein. | 0.643 |
Rsub_06575 | Rsub_07948 | A0A2V0P3G7 | A0A2V0PBF9 | Centrin. | Uncharacterized protein. | 0.723 |
Rsub_06575 | Rsub_09666 | A0A2V0P3G7 | A0A2V0PFX3 | Centrin. | Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.638 |
Rsub_06575 | Rsub_11059 | A0A2V0P3G7 | A0A2V0PFE1 | Centrin. | Uncharacterized protein. | 0.691 |
Rsub_06575 | Rsub_11504 | A0A2V0P3G7 | A0A2V0PKI4 | Centrin. | Uncharacterized protein. | 0.741 |
Rsub_06575 | Rsub_12336 | A0A2V0P3G7 | A0A2V0PMX0 | Centrin. | DNA repair protein RAD4. | 0.824 |
Rsub_06575 | Rsub_12990 | A0A2V0P3G7 | A0A2V0PK87 | Centrin. | Uncharacterized protein. | 0.657 |
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