STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_07370Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
Rsub_10456
Uncharacterized protein.
  
 
 
0.990
Rsub_07418
Flagellar outer dynein arm-docking complex.
    
 
 0.981
Rsub_01380
Uncharacterized protein.
    
 
 0.976
Rsub_08651
Calmodulin; Belongs to the calmodulin family.
     
 0.934
Rsub_10131
Calmodulin; Belongs to the calmodulin family.
     
0.932
Rsub_00399
Calcium-dependent kinase; Belongs to the protein kinase superfamily.
   
 0.928
Rsub_00667
Calcium-dependent kinase; Belongs to the protein kinase superfamily.
   
 0.928
Rsub_03763
Dynein light chain.
   
 0.926
Rsub_08497
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.926
Rsub_12285
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.926
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.