Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_02455 | Rsub_07295 | A0A2V0NSP6 | A0A2V0PA33 | Ubiquitin conjugation factor E4. | Uncharacterized protein. | 0.975 |
Rsub_02455 | Rsub_07559 | A0A2V0NSP6 | A0A2V0P5C2 | Ubiquitin conjugation factor E4. | Uncharacterized protein. | 0.460 |
Rsub_02455 | Rsub_12501 | A0A2V0NSP6 | A0A2V0PJ80 | Ubiquitin conjugation factor E4. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.703 |
Rsub_07295 | Rsub_02455 | A0A2V0PA33 | A0A2V0NSP6 | Uncharacterized protein. | Ubiquitin conjugation factor E4. | 0.975 |
Rsub_07295 | Rsub_07559 | A0A2V0PA33 | A0A2V0P5C2 | Uncharacterized protein. | Uncharacterized protein. | 0.460 |
Rsub_07295 | Rsub_12501 | A0A2V0PA33 | A0A2V0PJ80 | Uncharacterized protein. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.703 |
Rsub_07559 | Rsub_02455 | A0A2V0P5C2 | A0A2V0NSP6 | Uncharacterized protein. | Ubiquitin conjugation factor E4. | 0.460 |
Rsub_07559 | Rsub_07295 | A0A2V0P5C2 | A0A2V0PA33 | Uncharacterized protein. | Uncharacterized protein. | 0.460 |
Rsub_07559 | Rsub_12501 | A0A2V0P5C2 | A0A2V0PJ80 | Uncharacterized protein. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.578 |
Rsub_12501 | Rsub_02455 | A0A2V0PJ80 | A0A2V0NSP6 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Ubiquitin conjugation factor E4. | 0.703 |
Rsub_12501 | Rsub_07295 | A0A2V0PJ80 | A0A2V0PA33 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.703 |
Rsub_12501 | Rsub_07559 | A0A2V0PJ80 | A0A2V0P5C2 | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.578 |