STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_07569Uncharacterized protein. (1579 aa)    
Predicted Functional Partners:
Rsub_01839
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.999
Rsub_00486
Trafficking particle complex subunit 6B.
   
 0.999
Rsub_00939
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
Rsub_02554
Trafficking particle complex subunit 2.
    
 0.999
Rsub_08034
Trafficking particle complex subunit 2.
    
 0.999
Rsub_09073
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.999
Rsub_09458
Uncharacterized protein.
   
 0.999
Rsub_09030
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.999
Rsub_11511
Uncharacterized protein.
    
0.995
Rsub_03723
Foie-gras_1 domain-containing protein.
   
 
 0.994
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.