STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_08330Hydroxyacylglutathione hydrolase. (289 aa)    
Predicted Functional Partners:
Rsub_09836
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 
 0.972
Rsub_05549
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.962
Rsub_10166
Cytochrome b5 heme-binding domain-containing protein.
   
 
 0.959
Rsub_05404
Uncharacterized protein.
  
 
 0.958
Rsub_02348
D-lactate dehydrogenase.
    
 0.951
Rsub_06569
Thioredoxin domain-containing protein.
   
 0.950
Rsub_00560
Nitrate reductase.
  
 
 0.948
Rsub_09059
Nitrate reductase.
  
 
 0.948
Rsub_07729
Uncharacterized protein.
  
 
 0.948
Rsub_06212
Lactate dehydrogenase.
     
 0.928
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.