Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_02593 | Rsub_03181 | A0A2V0NRE4 | A0A2V0NTG9 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein 70 kDa. | 0.763 |
Rsub_02593 | Rsub_05913 | A0A2V0NRE4 | A0A2V0NZX2 | RRM domain-containing protein. | Uncharacterized protein. | 0.999 |
Rsub_02593 | Rsub_06787 | A0A2V0NRE4 | A0A2V0P1E5 | RRM domain-containing protein. | RRM domain-containing protein. | 0.658 |
Rsub_02593 | Rsub_07120 | A0A2V0NRE4 | A0A2V0P8C4 | RRM domain-containing protein. | Uncharacterized protein. | 0.658 |
Rsub_02593 | Rsub_07594 | A0A2V0NRE4 | A0A2V0P4A7 | RRM domain-containing protein. | Splicing factor U2af small subunit B-like. | 0.678 |
Rsub_02593 | Rsub_08432 | A0A2V0NRE4 | A0A2V0PA66 | RRM domain-containing protein. | Serine arginine-rich splicing factor-like. | 0.747 |
Rsub_02593 | Rsub_08646 | A0A2V0NRE4 | A0A2V0P719 | RRM domain-containing protein. | Serine arginine-rich splicing factor-like. | 0.952 |
Rsub_02593 | Rsub_10123 | A0A2V0NRE4 | A0A2V0PDR4 | RRM domain-containing protein. | Pre-mRNA-splicing factor. | 0.964 |
Rsub_02593 | Rsub_10251 | A0A2V0NRE4 | A0A2V0PDH9 | RRM domain-containing protein. | Serine arginine-rich splicing factor-like. | 0.663 |
Rsub_02593 | Rsub_10618 | A0A2V0NRE4 | A0A2V0PLN9 | RRM domain-containing protein. | Serine arginine-rich splicing factor. | 0.970 |
Rsub_03181 | Rsub_02593 | A0A2V0NTG9 | A0A2V0NRE4 | U1 small nuclear ribonucleoprotein 70 kDa. | RRM domain-containing protein. | 0.763 |
Rsub_03181 | Rsub_05913 | A0A2V0NTG9 | A0A2V0NZX2 | U1 small nuclear ribonucleoprotein 70 kDa. | Uncharacterized protein. | 0.579 |
Rsub_03181 | Rsub_06787 | A0A2V0NTG9 | A0A2V0P1E5 | U1 small nuclear ribonucleoprotein 70 kDa. | RRM domain-containing protein. | 0.738 |
Rsub_03181 | Rsub_07120 | A0A2V0NTG9 | A0A2V0P8C4 | U1 small nuclear ribonucleoprotein 70 kDa. | Uncharacterized protein. | 0.738 |
Rsub_03181 | Rsub_07594 | A0A2V0NTG9 | A0A2V0P4A7 | U1 small nuclear ribonucleoprotein 70 kDa. | Splicing factor U2af small subunit B-like. | 0.829 |
Rsub_03181 | Rsub_08432 | A0A2V0NTG9 | A0A2V0PA66 | U1 small nuclear ribonucleoprotein 70 kDa. | Serine arginine-rich splicing factor-like. | 0.672 |
Rsub_03181 | Rsub_08646 | A0A2V0NTG9 | A0A2V0P719 | U1 small nuclear ribonucleoprotein 70 kDa. | Serine arginine-rich splicing factor-like. | 0.963 |
Rsub_03181 | Rsub_10123 | A0A2V0NTG9 | A0A2V0PDR4 | U1 small nuclear ribonucleoprotein 70 kDa. | Pre-mRNA-splicing factor. | 0.731 |
Rsub_03181 | Rsub_10251 | A0A2V0NTG9 | A0A2V0PDH9 | U1 small nuclear ribonucleoprotein 70 kDa. | Serine arginine-rich splicing factor-like. | 0.625 |
Rsub_03181 | Rsub_10618 | A0A2V0NTG9 | A0A2V0PLN9 | U1 small nuclear ribonucleoprotein 70 kDa. | Serine arginine-rich splicing factor. | 0.946 |
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