STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_06347Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
Rsub_12701
Dynein regulatory complex 1.
  
 
 0.732
Rsub_10675
NYD-SP28 domain-containing protein.
  
 
 0.723
Rsub_04710
Uncharacterized protein.
   
 
 0.693
Rsub_01445
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.671
Rsub_02178
Phospholipid-translocating P-type ATPase.
    
 0.671
Rsub_01338
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.671
Rsub_02075
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.671
Rsub_09321
Uncharacterized protein.
    
 0.671
Rsub_12801
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
    
 
 0.562
Rsub_10565
Uncharacterized protein.
    
 
 0.506
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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