STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_07982Signal recognition particle 54 kDa. (393 aa)    
Predicted Functional Partners:
Rsub_01738
SRP9-21 domain-containing protein.
   
 0.969
Rsub_10322
Signal recognition particle subunit.
   
 0.968
Rsub_07143
Signal recognition particle 14 kDa.
    
 0.966
Rsub_08194
Signal recognition particle.
  
  
 
0.960
Rsub_02127
Uncharacterized protein.
   
 0.948
Rsub_13424
Signal recognition particle 54 kDa.
 
  
  0.916
Rsub_12667
Uncharacterized protein.
    
 0.913
Rsub_10220
Signal recognition particle subunit.
    
 0.913
Rsub_02839
Signal recognition particle receptor subunit alpha-like.
 
0.874
Rsub_11865
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
   
 0.773
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.