STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_08173Protein kinase domain-containing protein. (663 aa)    
Predicted Functional Partners:
Rsub_05565
Protein kinase domain-containing protein.
    
 0.533
Rsub_07923
Non-specific serine/threonine protein kinase.
    
0.533
Rsub_08899
Protein kinase domain-containing protein.
    
0.533
Rsub_08897
Protein kinase domain-containing protein.
    
0.533
Rsub_08900
Protein kinase domain-containing protein.
    
0.533
Rsub_04403
Uncharacterized protein.
     
 0.475
Rsub_05585
BTB domain-containing protein.
     
 0.475
Rsub_03698
Uncharacterized protein.
    
  0.462
Rsub_02156
MFS transporter.
     
 0.407
Rsub_05308
MFS transporter.
     
 0.407
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.