Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00405 | Rsub_04225 | A0A2V0NK78 | A0A2V0P341 | WD_REPEATS_REGION domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.987 |
Rsub_00405 | Rsub_07371 | A0A2V0NK78 | A0A2V0PC03 | WD_REPEATS_REGION domain-containing protein. | ATP-dependent RNA helicase. | 0.738 |
Rsub_00405 | Rsub_09978 | A0A2V0NK78 | A0A2V0PIZ4 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.818 |
Rsub_00579 | Rsub_04225 | A0A2V0NSG1 | A0A2V0P341 | Beta-adaptin A. | Ubiquitin-like domain-containing protein. | 0.428 |
Rsub_00579 | Rsub_04801 | A0A2V0NSG1 | A0A2V0NWS8 | Beta-adaptin A. | AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. | 0.886 |
Rsub_00579 | Rsub_04810 | A0A2V0NSG1 | A0A2V0NU25 | Beta-adaptin A. | Rhodanese domain-containing protein. | 0.829 |
Rsub_00579 | Rsub_07371 | A0A2V0NSG1 | A0A2V0PC03 | Beta-adaptin A. | ATP-dependent RNA helicase. | 0.680 |
Rsub_00579 | Rsub_09565 | A0A2V0NSG1 | A0A2V0PHK9 | Beta-adaptin A. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.966 |
Rsub_00579 | Rsub_10814 | A0A2V0NSG1 | A0A2V0PND1 | Beta-adaptin A. | Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | 0.411 |
Rsub_00579 | Rsub_12438 | A0A2V0NSG1 | A0A2V0PR46 | Beta-adaptin A. | Rhodanese domain-containing protein. | 0.829 |
Rsub_04225 | Rsub_00405 | A0A2V0P341 | A0A2V0NK78 | Ubiquitin-like domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.987 |
Rsub_04225 | Rsub_00579 | A0A2V0P341 | A0A2V0NSG1 | Ubiquitin-like domain-containing protein. | Beta-adaptin A. | 0.428 |
Rsub_04225 | Rsub_04801 | A0A2V0P341 | A0A2V0NWS8 | Ubiquitin-like domain-containing protein. | AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. | 0.445 |
Rsub_04225 | Rsub_04810 | A0A2V0P341 | A0A2V0NU25 | Ubiquitin-like domain-containing protein. | Rhodanese domain-containing protein. | 0.445 |
Rsub_04225 | Rsub_06373 | A0A2V0P341 | A0A2V0P8C1 | Ubiquitin-like domain-containing protein. | 50S ribosomal protein L27. | 0.428 |
Rsub_04225 | Rsub_07371 | A0A2V0P341 | A0A2V0PC03 | Ubiquitin-like domain-containing protein. | ATP-dependent RNA helicase. | 0.766 |
Rsub_04225 | Rsub_09565 | A0A2V0P341 | A0A2V0PHK9 | Ubiquitin-like domain-containing protein. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.543 |
Rsub_04225 | Rsub_10814 | A0A2V0P341 | A0A2V0PND1 | Ubiquitin-like domain-containing protein. | Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. | 0.428 |
Rsub_04225 | Rsub_12438 | A0A2V0P341 | A0A2V0PR46 | Ubiquitin-like domain-containing protein. | Rhodanese domain-containing protein. | 0.445 |
Rsub_04801 | Rsub_00579 | A0A2V0NWS8 | A0A2V0NSG1 | AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. | Beta-adaptin A. | 0.886 |
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