STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_10808Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
Rsub_03115
Uncharacterized protein.
    
   0.922
Rsub_04199
GYF_2 domain-containing protein.
    
   0.922
Rsub_03772
Uncharacterized protein.
    
   0.922
Rsub_00272
Translocase of chloroplast-like protein.
    
   0.871
Rsub_00791
Translocase of chloroplast chloroplastic-like protein.
    
   0.871
Rsub_02597
Fanciful K+ uptake-b family transporter.
    
   0.871
Rsub_04063
Uncharacterized protein.
    
   0.871
Rsub_04009
Uncharacterized protein.
    
   0.871
Rsub_08112
Uncharacterized protein.
    
   0.871
Rsub_08120
TOC75, chloroplastic.
    
   0.871
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.