Rsub_11574 protein (Raphidocelis subcapitata)

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

Rsub_11574

Uncharacterized protein. (488 aa)

Predicted Functional Partners:

Rsub_12067

0.594

Rsub_11719

0.513

Rsub_06737

0.509

Rsub_09426

0.494

Rsub_04522

0.459

Rsub_02386

0.448

Rsub_06837

0.447

Rsub_09821

0.440

Rsub_00764

0.431

Rsub_07420

0.431

Your Current Organism:

Raphidocelis subcapitata

NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rsub_00764	Rsub_02386	A0A2V0NNI4	A0A2V0NXG7	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Rsub_00764	Rsub_04522	A0A2V0NNI4	A0A2V0NXQ6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
Rsub_00764	Rsub_06737	A0A2V0NNI4	A0A2V0P6S2	Small nuclear ribonucleoprotein G.	U2 small nuclear ribonucleoprotein B.	0.993
Rsub_00764	Rsub_07420	A0A2V0NNI4	A0A2V0P490	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
Rsub_00764	Rsub_09426	A0A2V0NNI4	A0A2V0PH43	Small nuclear ribonucleoprotein G.	PHD finger-like domain-containing 5A.	0.998
Rsub_00764	Rsub_09821	A0A2V0NNI4	A0A2V0PAD6	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein F-like.	0.999
Rsub_00764	Rsub_11574	A0A2V0NNI4	A0A2V0PGK5	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.431
Rsub_02386	Rsub_00764	A0A2V0NXG7	A0A2V0NNI4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999
Rsub_02386	Rsub_04522	A0A2V0NXG7	A0A2V0NXQ6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
Rsub_02386	Rsub_06737	A0A2V0NXG7	A0A2V0P6S2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U2 small nuclear ribonucleoprotein B.	0.993
Rsub_02386	Rsub_07420	A0A2V0NXG7	A0A2V0P490	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
Rsub_02386	Rsub_09426	A0A2V0NXG7	A0A2V0PH43	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	PHD finger-like domain-containing 5A.	0.998
Rsub_02386	Rsub_09821	A0A2V0NXG7	A0A2V0PAD6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein F-like.	0.999
Rsub_02386	Rsub_11574	A0A2V0NXG7	A0A2V0PGK5	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.448
Rsub_04522	Rsub_00764	A0A2V0NXQ6	A0A2V0NNI4	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.999
Rsub_04522	Rsub_02386	A0A2V0NXQ6	A0A2V0NXG7	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
Rsub_04522	Rsub_06737	A0A2V0NXQ6	A0A2V0P6S2	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	U2 small nuclear ribonucleoprotein B.	0.993
Rsub_04522	Rsub_07420	A0A2V0NXQ6	A0A2V0P490	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
Rsub_04522	Rsub_09426	A0A2V0NXQ6	A0A2V0PH43	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	PHD finger-like domain-containing 5A.	0.988
Rsub_04522	Rsub_09821	A0A2V0NXQ6	A0A2V0PAD6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein F-like.	0.999