STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_09536Glutamine amidotransferase type-2 domain-containing protein. (781 aa)    
Predicted Functional Partners:
Rsub_05111
Delta-1-pyrroline-5-carboxylate synthase A.
  
 
 0.829
Rsub_01339
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 
 0.736
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 
 0.733
Rsub_02057
L-asparaginase.
     
 0.711
Rsub_12694
Histidinol-phosphate aminotransferase.
  
 
 0.702
Rsub_01310
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.672
Rsub_09804
Glutamate 5-kinase.
   
 
 0.637
Rsub_12659
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.637
Rsub_13209
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.637
Rsub_07003
Fumarate hydratase mitochondrial.
     
 0.635
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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