STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_12592Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
Rsub_06298
Vacuolar sorting-associated protein.
    
 0.998
Rsub_07402
Uncharacterized protein.
    
 0.992
Rsub_09402
UBA domain-containing protein.
    
 0.992
Rsub_03019
Vacuolar sorting-associated protein; Belongs to the VPS28 family.
   
 0.974
Rsub_09439
TPR_REGION domain-containing protein.
    
 0.969
Rsub_10816
ATPase AAA.
    
 0.969
Rsub_07197
Uncharacterized protein.
    
 0.935
Rsub_00159
Uncharacterized protein.
    
 0.907
Rsub_00189
Vacuolar sorting-associated 32 protein.
    
 0.907
Rsub_07615
Uncharacterized protein.
    
0.907
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.