STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_11776Polyprenol reductase-like. (320 aa)    
Predicted Functional Partners:
Rsub_08841
Uncharacterized protein.
     
 0.968
Rsub_08249
Steroid 5-alpha-reductase DET2; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide.
  
  
0.727
Rsub_11517
Prolyl-tRNA synthetase.
     
 0.708
Rsub_02710
Short-chain dehydrogenase reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.685
Rsub_09708
3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.
     
 0.573
Rsub_11700
Methionine adenosyltransferase 2 subunit beta.
     
 0.573
Rsub_07319
Testosterone 17-beta-dehydrogenase.
     
 0.565
Rsub_09374
Uncharacterized protein.
     
 0.565
Rsub_01405
Uncharacterized protein.
      
 0.556
Rsub_07124
Uncharacterized protein.
    
 
 0.535
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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