STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_11297Cupin_2 domain-containing protein. (400 aa)    
Predicted Functional Partners:
Rsub_02754
GDP-mannose 4,6-dehydratase.
  
 
 0.904
Rsub_03377
UDP-glucose 6-dehydrogenase.
  
 
 0.892
Rsub_01928
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.834
Rsub_05136
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.834
Rsub_09357
Uncharacterized protein.
    
 0.828
Rsub_01438
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P. Belongs to the phosphohexose mutase family.
  
 
 0.815
Rsub_07850
Phosphoglucomutase.
  
 
 0.815
Rsub_11921
Phosphoglucomutase.
  
 
 0.815
Rsub_04574
Cytochrome c6.
     
 0.741
Rsub_12564
Fructose 1,6-bisphosphatase.
     
 0.726
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.