STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_10710Uncharacterized protein. (1072 aa)    
Predicted Functional Partners:
Rsub_10618
Serine arginine-rich splicing factor.
    
 
 0.693
Rsub_08415
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.667
Rsub_03283
Uncharacterized protein.
    
 
 0.593
Rsub_08432
Serine arginine-rich splicing factor-like.
    
 
 0.593
Rsub_10251
Serine arginine-rich splicing factor-like.
    
 
 0.593
Rsub_00637
Importin-like protein.
   
  
 0.527
Rsub_04144
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 
 0.478
Rsub_05926
Uncharacterized protein.
   
 
 0.457
Rsub_01236
Transportin-like protein.
   
 
 0.436
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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