STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_12645Chorismate synthase. (424 aa)    
Predicted Functional Partners:
Rsub_08563
Uncharacterized protein.
  
 
 0.995
Rsub_11427
Indole-3-glycerol-phosphate synthase.
  
 
 0.988
Rsub_01397
Isochorismate synthase.
  
 
 0.984
Rsub_07545
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
  
 
 0.984
Rsub_12808
Arogenate dehydrogenase chloroplastic-like.
  
 0.984
Rsub_03162
Anthranilate synthase beta subunit, chloroplastic-like.
  
 
 0.981
Rsub_07506
Anthranilate synthase component.
  
 
 0.971
Rsub_08291
Aminobenzoate synthetase.
  
 
 0.968
Rsub_07940
DHQ_synthase domain-containing protein.
 
 
 0.939
Rsub_04542
Anthranilate phosphoribosyltransferase.
  
 
 0.932
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.