STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_11401Uncharacterized protein. (503 aa)    
Predicted Functional Partners:
Rsub_05220
SAL1 phosphatase.
     
 0.955
Rsub_12745
Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity.
    
 0.953
Rsub_07965
Multiple inositol polyphosphate phosphatase-like; Belongs to the histidine acid phosphatase family.
     
 0.926
Rsub_01700
Inositol-tetrakisphosphate 1-kinase-like.
  
  
 0.872
Rsub_06721
Uncharacterized protein.
     
 0.806
Rsub_02179
Isocitrate lyase.
   
 
 0.616
Rsub_05319
Isocitrate lyase.
   
 
 0.616
Rsub_10096
Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.
      
 0.535
Rsub_03892
Protein kinase domain-containing protein.
   
 0.512
Rsub_11136
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.508
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.