Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rsub_00151 | Rsub_00300 | A0A2V0NPL3 | A0A2V0NKQ2 | Selenocysteine-specific elongation factor. | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | 0.965 |
Rsub_00151 | Rsub_12112 | A0A2V0NPL3 | A0A2V0PPN3 | Selenocysteine-specific elongation factor. | Heterogeneous nuclear ribonucleoprotein-like. | 0.508 |
Rsub_00300 | Rsub_00151 | A0A2V0NKQ2 | A0A2V0NPL3 | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | Selenocysteine-specific elongation factor. | 0.965 |
Rsub_00300 | Rsub_12112 | A0A2V0NKQ2 | A0A2V0PPN3 | Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. | Heterogeneous nuclear ribonucleoprotein-like. | 0.552 |
Rsub_04349 | Rsub_05186 | A0A2V0NWA1 | A0A2V0P0X4 | Peptidyl-prolyl cis-trans isomerase E. | RRM domain-containing protein. | 0.491 |
Rsub_04349 | Rsub_06467 | A0A2V0NWA1 | A0A2V0PAK5 | Peptidyl-prolyl cis-trans isomerase E. | THO complex subunit 4. | 0.513 |
Rsub_04349 | Rsub_10013 | A0A2V0NWA1 | A0A2V0PED2 | Peptidyl-prolyl cis-trans isomerase E. | Splicing factor 3B subunit 6. | 0.577 |
Rsub_04349 | Rsub_12112 | A0A2V0NWA1 | A0A2V0PPN3 | Peptidyl-prolyl cis-trans isomerase E. | Heterogeneous nuclear ribonucleoprotein-like. | 0.546 |
Rsub_05186 | Rsub_04349 | A0A2V0P0X4 | A0A2V0NWA1 | RRM domain-containing protein. | Peptidyl-prolyl cis-trans isomerase E. | 0.491 |
Rsub_05186 | Rsub_06467 | A0A2V0P0X4 | A0A2V0PAK5 | RRM domain-containing protein. | THO complex subunit 4. | 0.673 |
Rsub_05186 | Rsub_08432 | A0A2V0P0X4 | A0A2V0PA66 | RRM domain-containing protein. | Serine arginine-rich splicing factor-like. | 0.671 |
Rsub_05186 | Rsub_08646 | A0A2V0P0X4 | A0A2V0P719 | RRM domain-containing protein. | Serine arginine-rich splicing factor-like. | 0.703 |
Rsub_05186 | Rsub_11510 | A0A2V0P0X4 | A0A2V0PG52 | RRM domain-containing protein. | Cleavage stimulating factor. | 0.906 |
Rsub_05186 | Rsub_12112 | A0A2V0P0X4 | A0A2V0PPN3 | RRM domain-containing protein. | Heterogeneous nuclear ribonucleoprotein-like. | 0.524 |
Rsub_06467 | Rsub_04349 | A0A2V0PAK5 | A0A2V0NWA1 | THO complex subunit 4. | Peptidyl-prolyl cis-trans isomerase E. | 0.513 |
Rsub_06467 | Rsub_05186 | A0A2V0PAK5 | A0A2V0P0X4 | THO complex subunit 4. | RRM domain-containing protein. | 0.673 |
Rsub_06467 | Rsub_08432 | A0A2V0PAK5 | A0A2V0PA66 | THO complex subunit 4. | Serine arginine-rich splicing factor-like. | 0.768 |
Rsub_06467 | Rsub_08646 | A0A2V0PAK5 | A0A2V0P719 | THO complex subunit 4. | Serine arginine-rich splicing factor-like. | 0.820 |
Rsub_06467 | Rsub_11510 | A0A2V0PAK5 | A0A2V0PG52 | THO complex subunit 4. | Cleavage stimulating factor. | 0.738 |
Rsub_06467 | Rsub_12112 | A0A2V0PAK5 | A0A2V0PPN3 | THO complex subunit 4. | Heterogeneous nuclear ribonucleoprotein-like. | 0.514 |
page 1 of 3