STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rsub_12574Multicopper ferroxidase; Belongs to the multicopper oxidase family. (1153 aa)    
Predicted Functional Partners:
Rsub_11903
Heme oxygenase chloroplastic-like.
    
 0.961
Rsub_12421
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.953
Rsub_04067
Uncharacterized protein.
     
 0.946
Rsub_02909
Uncharacterized protein.
    
 0.939
Rsub_12638
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 0.804
Rsub_09032
Plasma membrane iron permease.
   
 
 0.780
Rsub_07873
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.
   
 
 0.776
Rsub_07833
Uncharacterized protein.
    
 0.690
Rsub_09450
Uncharacterized protein.
      
 0.626
Rsub_06468
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.
   
 
 0.613
Your Current Organism:
Raphidocelis subcapitata
NCBI taxonomy Id: 307507
Other names: Kirchneriella subcapitata, R. subcapitata
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