STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_9457Ubiquitin thioesterase otubain-like. (575 aa)    
Predicted Functional Partners:
C2E21_4788
Ubiquitin-60S ribosomal L40.
    
   0.923
C2E21_7350
Ubiquitin-conjugating enzyme E2 E1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.803
C2E21_7053
Ubiquitin-conjugating enzyme E2 28-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.803
C2E21_5381
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.803
C2E21_2879
Vacuolar sorting-associated 25.
    
 0.803
C2E21_1440
Ubiquitin-conjugating enzyme E2 36; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.803
C2E21_6005
Ubiquitin domain containing.
    
 
 0.776
C2E21_0943
Ubiquitin-40S ribosomal S27a.
    
 
 0.776
C2E21_4938
E3 ubiquitin-ligase COP1-like isoform X1.
    
 0.686
C2E21_0266
Receptor homology transmembrane domain-and RING domain-containing 1-like isoform X1.
    
 0.679
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.