STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_9097UBX domain-containing 2 isoform X1. (466 aa)    
Predicted Functional Partners:
C2E21_3498
NPL4 1.
    
 0.938
C2E21_1432
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
  0.909
C2E21_1956
Ubiquitin fusion degradation 1-like protein isoform X1.
    
 0.898
C2E21_0832
Ubiquitin fusion degradation 1.
    
 0.898
C2E21_1553
UBA and UBX domain-containing protein.
    
 
 0.826
C2E21_5778
40S ribosomal S27.
    
 0.726
C2E21_9298
Cell division cycle 48-like protein.
    
 0.711
C2E21_9121
Spermatogenesis-associated.
    
 0.711
C2E21_8824
Cell division control 48-like protein B; Belongs to the AAA ATPase family.
    
 0.711
C2E21_6611
Cell division cycle 48-like protein.
    
 0.711
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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