STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_8774Pleiotropic regulatory locus 1. (508 aa)    
Predicted Functional Partners:
C2E21_9058
Spliceosome nuclear pre-mRNA splicing factor.
   
0.995
C2E21_7407
Xylulokinase.
   
 0.995
C2E21_6745
Pre-mRNA-splicing factor SPF27-like protein isoform A.
   
 0.995
C2E21_0907
Cell division cycle 5 isoform A.
   
 0.995
C2E21_0542
Beta-catenin 1.
   
 0.984
C2E21_2479
Crooked neck 1.
   
 
 0.968
C2E21_1643
SNW SKI-interacting-like.
   
 
 0.968
C2E21_4114
G10 family.
   
 
 0.966
C2E21_6630
Coiled-coil domain-containing 94-like protein.
    
 
 0.964
C2E21_3880
Pre-mRNA-splicing factor SYF1.
   
 
 0.964
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.