STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_8855Tesmin TSO1-like CXC 5. (883 aa)    
Predicted Functional Partners:
C2E21_3137
ALWAYS EARLY 3.
   
 0.840
C2E21_2728
Transcription factor DPB isoform X2.
   
 0.726
C2E21_7728
E2F family transcription factor.
   
 0.690
C2E21_6248
WD repeat-containing 32.
   
 0.633
C2E21_5012
WD-40 repeat-containing MSI4-like.
   
 0.633
C2E21_4120
WD-40 repeat-containing MSI1.
   
 0.633
C2E21_9568
Retinoblastoma.
   
 0.603
C2E21_4380
Retinoblastoma-related 1-like isoform X1.
   
 0.603
C2E21_9575
Reverse transcriptase,R.
    
  0.400
C2E21_9007
Tyrosine-specific transport-like.
    
  0.400
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.