STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_8381PALP domain-containing protein. (494 aa)    
Predicted Functional Partners:
C2E21_4575
Tryptophan synthase alpha chain; Belongs to the TrpA family.
 
 0.994
C2E21_4577
Tryptophan synthase alpha chain; Belongs to the TrpA family.
  
 0.991
C2E21_6975
Indole-3-glycerol phosphate synthase.
 
 
 0.976
C2E21_0252
Anthranilate phosphoribosyltransferase.
  
 
 0.965
C2E21_0690
N-(5-phosphoribosyl)anthranilate isomerase chloroplastic-like.
 
 
 0.965
C2E21_6473
Anthranilate synthase beta subunit.
  
 
 0.964
C2E21_7124
Threonine dehydratase.
  
 0.922
C2E21_6100
Threonine dehydratase.
  
 0.922
C2E21_4144
Serine racemase.
  
 0.922
C2E21_0021
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.919
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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