STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_8147SAP domain-containing ribonucleo. (455 aa)    
Predicted Functional Partners:
C2E21_0386
DEAD-box ATP-dependent RNA helicase 15-like isoform X1.
   
 0.968
C2E21_5647
Aminoacrylate hydrolase.
   
 0.965
C2E21_7916
THO complex subunit 1.
    
 0.898
C2E21_4578
Friend of PRMT1 duplication.
   
 0.863
C2E21_8989
THO complex subunit 7B-like.
   
 0.847
C2E21_8536
THO complex subunit 2 isoform X2.
   
 0.840
C2E21_2707
THO complex subunit 5.
    
 0.831
C2E21_1676
THO complex subunit 3.
     
 0.808
C2E21_1266
Mago nashi-like protein.
   
  0.723
C2E21_0029
RNA-binding 8A.
   
 
  0.709
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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