STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_7665DNA ligase 1 isoform X1. (1523 aa)    
Predicted Functional Partners:
C2E21_8905
Cleavage and polyadenylation specificity factor CPSF30.
   
 0.999
C2E21_6078
ATP-dependent DNA helicase 2 subunit KU70 isoform X1.
   
 0.999
C2E21_5688
ATP-dependent DNA helicase 2 subunit KU80.
   
 0.999
C2E21_7977
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.993
C2E21_6587
DNA polymerase lambda.
  
 0.993
C2E21_6531
DNA-directed DNA RNA polymerase mu isoform B.
  
 0.993
C2E21_3133
DNA polymerase lambda.
  
 0.993
C2E21_1212
DNA repair RAD50 isoform A.
   
 0.992
C2E21_3388
DNA repair helicase XPB1.
   
 
 0.989
C2E21_2951
Cyclin-U4-1.
   
 0.988
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.