STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_7418Reticulon-like protein. (1431 aa)    
Predicted Functional Partners:
C2E21_8905
Cleavage and polyadenylation specificity factor CPSF30.
    
 0.999
C2E21_3617
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.914
C2E21_5704
Symplekin isoform X1.
   
 0.900
C2E21_1215
Fanconi anemia group M isoform X3.
   
 0.883
C2E21_8552
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.865
C2E21_6078
ATP-dependent DNA helicase 2 subunit KU70 isoform X1.
   
 0.863
C2E21_5688
ATP-dependent DNA helicase 2 subunit KU80.
    
 0.863
C2E21_5335
Glycosyltransferase LARGE1.
    
 0.863
C2E21_4245
ENTH VHS.
    
 0.763
C2E21_6364
Bifunctional polynucleotide phosphatase kinase.
   
  
 0.754
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.