STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_6917Glutathione S-transferase; Belongs to the GST superfamily. (321 aa)    
Predicted Functional Partners:
C2E21_8506
Putative methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.933
C2E21_5641
Eukaryotic translation elongation factor 1 alpha 2.
   
 0.843
C2E21_4521
Homogentisate 1,2-dioxygenase.
  
 
 0.763
C2E21_2285
Fumarylacetoacetase.
  
 
 0.762
C2E21_6265
Elongation factor 2.
   
 
 0.672
C2E21_8748
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 
 0.664
C2E21_8739
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 
 0.664
C2E21_5412
DNA-directed RNA polymerases IV and V subunit 3.
   
 
 0.664
C2E21_5943
Glutamyl-tRNA synthetase isoform B.
   
 0.655
C2E21_3546
DNA-directed RNA polymerases and III subunit RPABC2.
   
 
 0.627
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.