STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_7000ATP-dependent Clp protease adapter chloroplastic. (98 aa)    
Predicted Functional Partners:
C2E21_3985
ATP-dependent Clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family.
  
 
 0.684
C2E21_7379
ANK_REP_REGION domain-containing protein.
  
 
 0.658
C2E21_5189
Chaperone 1; Belongs to the ClpA/ClpB family.
  
 
 0.658
C2E21_1693
Chaperone chloroplastic-like; Belongs to the ClpA/ClpB family.
  
 
 0.658
C2E21_1728
ATP-dependent chaperone.
  
 
 0.658
C2E21_0200
ATP-dependent Clp protease ATP-binding subunit-like protein chloroplastic; Belongs to the ClpA/ClpB family.
  
 
 0.658
C2E21_4543
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
   
 
 0.594
C2E21_1767
Clp protease adaptor.
      
 0.574
C2E21_3912
Cyclase expressed.
  
    0.456
C2E21_6325
RNA binding.
  
     0.444
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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