STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E21_6501Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
C2E21_8905
Cleavage and polyadenylation specificity factor CPSF30.
   
 0.913
C2E21_1476
Nuclear cap-binding protein subunit 2.
    
 0.896
C2E21_9463
Nuclear cap-binding subunit 1 isoform A.
   
 0.862
C2E21_5831
SRSF kinase 1.
    
 0.843
C2E21_3401
Dual specificity kinase.
    
 0.843
C2E21_5647
Aminoacrylate hydrolase.
   
 0.832
C2E21_3617
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.808
C2E21_3854
Transportin-3 isoform X1.
   
 
 0.805
C2E21_5335
Glycosyltransferase LARGE1.
   
 0.796
C2E21_4245
ENTH VHS.
    
 0.787
Your Current Organism:
Chlorella sorokiniana
NCBI taxonomy Id: 3076
Other names: C. sorokiniana, Chlorella sorokiniana Shihira & R.W.Krauss, Chlorella sp. C74, Chlorella sp. GXNN 01, Chlorophyta sp. LWG002615, SAG 211-8k
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